Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Timp3P39876 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Timp3P39876 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Timp3P39876 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.33□□□□□ -0.43
Timp3P39876 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Timp3P39876 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.33□□□□□ -0.44
Timp3P39876 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.33□□□□□ -0.44
Timp3P39876 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Timp3P39876 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.32□□□□□ -0.44
Timp3P39876 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.32□□□□□ -0.44
Timp3P39876 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Timp3P39876 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.32□□□□□ -0.44
Timp3P39876 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.32□□□□□ -0.44
Timp3P39876 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.32□□□□□ -0.44
Timp3P39876 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.32□□□□□ -0.44
Timp3P39876 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Gm17271-201ENSMUST00000165535 355 ntBASIC12.32□□□□□ -0.44
Timp3P39876 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.32□□□□□ -0.44
Timp3P39876 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.32□□□□□ -0.44
Timp3P39876 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.32□□□□□ -0.44
Timp3P39876 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Timp3P39876 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Timp3P39876 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Timp3P39876 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Timp3P39876 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.32□□□□□ -0.44
Timp3P39876 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Timp3P39876 BC037039-201ENSMUST00000192003 2205 ntBASIC12.31□□□□□ -0.44
Timp3P39876 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.31□□□□□ -0.44
Timp3P39876 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Timp3P39876 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.31□□□□□ -0.44
Timp3P39876 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.31□□□□□ -0.44
Timp3P39876 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Timp3P39876 Gm14822-201ENSMUST00000122247 291 ntBASIC12.31□□□□□ -0.44
Timp3P39876 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Timp3P39876 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Timp3P39876 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Timp3P39876 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms