Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.22■□□□□ 0.03
Slc6a13P31649 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.22■□□□□ 0.03
Slc6a13P31649 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Gm6443-201ENSMUST00000203599 874 ntBASIC15.22■□□□□ 0.03
Slc6a13P31649 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.22■□□□□ 0.03
Slc6a13P31649 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc6a13P31649 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a13P31649 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.21■□□□□ 0.03
Slc6a13P31649 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Slc6a13P31649 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.21■□□□□ 0.03
Slc6a13P31649 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a13P31649 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a13P31649 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.21■□□□□ 0.02
Slc6a13P31649 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a13P31649 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Gm9385-201ENSMUST00000117563 472 ntBASIC15.2■□□□□ 0.02
Slc6a13P31649 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.2■□□□□ 0.02
Slc6a13P31649 Thap2-203ENSMUST00000218989 527 ntBASIC15.2■□□□□ 0.02
Slc6a13P31649 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a13P31649 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc6a13P31649 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Slc6a13P31649 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms