Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vcam1P29533 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.18■□□□□ 0.34
Vcam1P29533 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.18■□□□□ 0.34
Vcam1P29533 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vcam1P29533 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vcam1P29533 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.17■□□□□ 0.34
Vcam1P29533 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.17■□□□□ 0.34
Vcam1P29533 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vcam1P29533 Gm44344-201ENSMUST00000200287 129 ntBASIC17.17■□□□□ 0.34
Vcam1P29533 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 BC037039-201ENSMUST00000192003 2205 ntBASIC17.17■□□□□ 0.34
Vcam1P29533 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Vcam1P29533 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vcam1P29533 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcam1P29533 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Vcam1P29533 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Vcam1P29533 Gm24543-201ENSMUST00000103867 82 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.16■□□□□ 0.34
Vcam1P29533 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vcam1P29533 Gm29310-201ENSMUST00000185468 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21825-201ENSMUST00000185728 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm29109-201ENSMUST00000185895 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21896-201ENSMUST00000186520 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21873-201ENSMUST00000186728 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21794-201ENSMUST00000187056 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21880-201ENSMUST00000187275 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21826-201ENSMUST00000187451 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21198-201ENSMUST00000188393 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21749-201ENSMUST00000189343 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21901-201ENSMUST00000189568 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm29424-201ENSMUST00000189716 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm28599-201ENSMUST00000189838 694 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21867-201ENSMUST00000189917 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm29269-201ENSMUST00000190087 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21722-201ENSMUST00000190153 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm28423-201ENSMUST00000190701 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21899-201ENSMUST00000190745 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21910-201ENSMUST00000191163 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21849-201ENSMUST00000191571 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm28678-201ENSMUST00000191593 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm20910-201ENSMUST00000193268 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21871-201ENSMUST00000194621 696 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.16■□□□□ 0.34
Vcam1P29533 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
Vcam1P29533 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.16■□□□□ 0.34
Vcam1P29533 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcam1P29533 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcam1P29533 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.15■□□□□ 0.34
Vcam1P29533 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.15■□□□□ 0.34
Vcam1P29533 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcam1P29533 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vcam1P29533 Gm15487-201ENSMUST00000122373 465 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms