Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Tnfrsf1bP25119 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Gm5177-201ENSMUST00000183092 997 ntBASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfrsf1bP25119 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Tnfrsf1bP25119 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfrsf1bP25119 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfrsf1bP25119 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Gm11594-201ENSMUST00000122313 162 ntBASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfrsf1bP25119 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Gm17968-201ENSMUST00000194902 784 ntBASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Gm43767-201ENSMUST00000198933 381 ntBASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Thap2-203ENSMUST00000218989 527 ntBASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Tnfrsf1bP25119 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms