Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.7□□□□□ -0.22
Cbx3P23198 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.7□□□□□ -0.22
Cbx3P23198 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.7□□□□□ -0.22
Cbx3P23198 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cbx3P23198 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.7□□□□□ -0.22
Cbx3P23198 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.7□□□□□ -0.22
Cbx3P23198 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cbx3P23198 Gm10812-201ENSMUST00000099864 546 ntBASIC13.7□□□□□ -0.22
Cbx3P23198 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cbx3P23198 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cbx3P23198 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cbx3P23198 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cbx3P23198 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cbx3P23198 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.69□□□□□ -0.22
Cbx3P23198 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cbx3P23198 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.69□□□□□ -0.22
Cbx3P23198 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cbx3P23198 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cbx3P23198 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Cbx3P23198 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cbx3P23198 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cbx3P23198 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.68□□□□□ -0.22
Cbx3P23198 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cbx3P23198 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Gm27463-201ENSMUST00000183569 57 ntBASIC13.68□□□□□ -0.22
Cbx3P23198 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.68□□□□□ -0.22
Cbx3P23198 Odf3b-204ENSMUST00000227834 930 ntBASIC13.68□□□□□ -0.22
Cbx3P23198 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cbx3P23198 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cbx3P23198 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Cbx3P23198 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cbx3P23198 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cbx3P23198 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cbx3P23198 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.68□□□□□ -0.22
Cbx3P23198 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cbx3P23198 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.67□□□□□ -0.22
Cbx3P23198 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.67□□□□□ -0.22
Cbx3P23198 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.67□□□□□ -0.22
Cbx3P23198 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.67□□□□□ -0.22
Cbx3P23198 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cbx3P23198 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cbx3P23198 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.67□□□□□ -0.22
Cbx3P23198 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cbx3P23198 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms