Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.17□□□□□ -0.14
TP20293 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.17□□□□□ -0.14
TP20293 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TP20293 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TP20293 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
TP20293 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.16□□□□□ -0.14
TP20293 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.16□□□□□ -0.14
TP20293 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.16□□□□□ -0.14
TP20293 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.16□□□□□ -0.14
TP20293 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.16□□□□□ -0.14
TP20293 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TP20293 Mir5126-201ENSMUST00000175513 77 ntBASIC14.16□□□□□ -0.14
TP20293 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.16□□□□□ -0.14
TP20293 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TP20293 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TP20293 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TP20293 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.15□□□□□ -0.14
TP20293 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Mir5131-201ENSMUST00000175426 93 ntBASIC14.15□□□□□ -0.14
TP20293 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
TP20293 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TP20293 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TP20293 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TP20293 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TP20293 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.15□□□□□ -0.14
TP20293 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TP20293 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
TP20293 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.14□□□□□ -0.15
TP20293 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TP20293 Gm12350-201ENSMUST00000121208 462 ntBASIC14.14□□□□□ -0.15
TP20293 Gm18733-201ENSMUST00000173950 856 ntBASIC14.14□□□□□ -0.15
TP20293 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Gm8318-201ENSMUST00000182954 872 ntBASIC14.14□□□□□ -0.15
TP20293 Gm2651-201ENSMUST00000203560 838 ntBASIC14.14□□□□□ -0.15
TP20293 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.14□□□□□ -0.15
TP20293 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.14□□□□□ -0.15
TP20293 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TP20293 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms