Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgn1P18608 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgn1P18608 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmgn1P18608 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmgn1P18608 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmgn1P18608 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.75□□□□□ -0.21
Hmgn1P18608 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.75□□□□□ -0.21
Hmgn1P18608 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.75□□□□□ -0.21
Hmgn1P18608 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.75□□□□□ -0.21
Hmgn1P18608 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmgn1P18608 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hmgn1P18608 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Hmgn1P18608 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.74□□□□□ -0.21
Hmgn1P18608 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.74□□□□□ -0.21
Hmgn1P18608 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgn1P18608 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgn1P18608 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.73□□□□□ -0.21
Hmgn1P18608 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.73□□□□□ -0.21
Hmgn1P18608 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gm8655-201ENSMUST00000221159 852 ntBASIC13.73□□□□□ -0.21
Hmgn1P18608 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgn1P18608 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgn1P18608 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Gm43767-201ENSMUST00000198933 381 ntBASIC13.72□□□□□ -0.21
Hmgn1P18608 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hmgn1P18608 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgn1P18608 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms