Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trim30aP15533 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim30aP15533 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30aP15533 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30aP15533 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim30aP15533 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30aP15533 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30aP15533 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim30aP15533 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.52■□□□□ 0.24
Trim30aP15533 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim30aP15533 Gm18666-201ENSMUST00000190039 958 ntBASIC16.52■□□□□ 0.24
Trim30aP15533 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30aP15533 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30aP15533 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30aP15533 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30aP15533 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.51■□□□□ 0.23
Trim30aP15533 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim30aP15533 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.51■□□□□ 0.23
Trim30aP15533 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim30aP15533 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trim30aP15533 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30aP15533 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm11539-201ENSMUST00000119837 557 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm27405-201ENSMUST00000184201 112 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Gm27275-201ENSMUST00000184318 272 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim30aP15533 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim30aP15533 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.5■□□□□ 0.23
Trim30aP15533 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim30aP15533 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.49■□□□□ 0.23
Trim30aP15533 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim30aP15533 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim30aP15533 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim30aP15533 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim30aP15533 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim30aP15533 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim30aP15533 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms