Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ccl3P10855 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Shd-206ENSMUST00000225145 998 ntBASIC13.2□□□□□ -0.3
Ccl3P10855 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccl3P10855 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccl3P10855 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl3P10855 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccl3P10855 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.19□□□□□ -0.3
Ccl3P10855 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccl3P10855 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccl3P10855 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 App-207ENSMUST00000227737 2827 ntBASIC13.19□□□□□ -0.3
Ccl3P10855 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl3P10855 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccl3P10855 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ccl3P10855 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccl3P10855 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Gm15321-201ENSMUST00000121290 288 ntBASIC13.18□□□□□ -0.3
Ccl3P10855 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.18□□□□□ -0.3
Ccl3P10855 Gm7653-201ENSMUST00000214567 508 ntBASIC13.18□□□□□ -0.3
Ccl3P10855 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.18□□□□□ -0.3
Ccl3P10855 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl3P10855 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.18□□□□□ -0.3
Ccl3P10855 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl3P10855 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms