Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.04□□□□□ -0.32
PtcraP0C6B2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PtcraP0C6B2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.03□□□□□ -0.32
PtcraP0C6B2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.03□□□□□ -0.32
PtcraP0C6B2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.03□□□□□ -0.32
PtcraP0C6B2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.03□□□□□ -0.32
PtcraP0C6B2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.03□□□□□ -0.32
PtcraP0C6B2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PtcraP0C6B2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PtcraP0C6B2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.02□□□□□ -0.33
PtcraP0C6B2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PtcraP0C6B2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.01□□□□□ -0.33
PtcraP0C6B2 Gm13597-201ENSMUST00000121239 375 ntBASIC13.01□□□□□ -0.33
PtcraP0C6B2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.01□□□□□ -0.33
PtcraP0C6B2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms