Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxa3P02831 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.6□□□□□ -0.39
Hoxa3P02831 Gm5177-201ENSMUST00000183092 997 ntBASIC12.6□□□□□ -0.39
Hoxa3P02831 Gm18246-201ENSMUST00000221023 728 ntBASIC12.6□□□□□ -0.39
Hoxa3P02831 Chchd1-203ENSMUST00000224633 557 ntBASIC12.6□□□□□ -0.39
Hoxa3P02831 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxa3P02831 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hoxa3P02831 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxa3P02831 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxa3P02831 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hoxa3P02831 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.59□□□□□ -0.39
Hoxa3P02831 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Hoxa3P02831 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxa3P02831 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.59□□□□□ -0.39
Hoxa3P02831 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.59□□□□□ -0.39
Hoxa3P02831 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxa3P02831 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa3P02831 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa3P02831 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Hoxa3P02831 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa3P02831 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa3P02831 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxa3P02831 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Gm14722-201ENSMUST00000118943 689 ntBASIC12.58□□□□□ -0.4
Hoxa3P02831 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxa3P02831 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxa3P02831 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxa3P02831 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa3P02831 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms