Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm23243-201ENSMUST00000180047 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm24659-201ENSMUST00000180212 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm24169-201ENSMUST00000180244 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm23689-201ENSMUST00000180354 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm27359-201ENSMUST00000184153 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm27785-201ENSMUST00000184268 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm27466-201ENSMUST00000184396 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Gm27703-201ENSMUST00000184836 110 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sp1O89090 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.14■□□□□ 0.01
Sp1O89090 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.14■□□□□ 0.01
Sp1O89090 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp1O89090 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
Sp1O89090 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.13■□□□□ 0.01
Sp1O89090 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sp1O89090 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sp1O89090 Mir449b-201ENSMUST00000104833 80 ntBASIC15.13■□□□□ 0.01
Sp1O89090 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Gm13616-201ENSMUST00000120600 222 ntBASIC15.13■□□□□ 0.01
Sp1O89090 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.13■□□□□ 0.01
Sp1O89090 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
Sp1O89090 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sp1O89090 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sp1O89090 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp1O89090 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sp1O89090 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.12■□□□□ 0.01
Sp1O89090 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Gm18737-201ENSMUST00000173594 937 ntBASIC15.12■□□□□ 0.01
Sp1O89090 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.12■□□□□ 0.01
Sp1O89090 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.12■□□□□ 0.01
Sp1O89090 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.12■□□□□ 0.01
Sp1O89090 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sp1O89090 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp1O89090 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sp1O89090 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp1O89090 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp1O89090 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp1O89090 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms