Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hcn3O88705 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.41□□□□□ -0.1
Hcn3O88705 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.41□□□□□ -0.1
Hcn3O88705 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hcn3O88705 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hcn3O88705 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn3O88705 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.41□□□□□ -0.1
Hcn3O88705 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn3O88705 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hcn3O88705 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Gm27742-201ENSMUST00000184667 60 ntBASIC14.4□□□□□ -0.1
Hcn3O88705 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.4□□□□□ -0.1
Hcn3O88705 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.4□□□□□ -0.1
Hcn3O88705 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hcn3O88705 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hcn3O88705 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn3O88705 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hcn3O88705 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hcn3O88705 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.4□□□□□ -0.1
Hcn3O88705 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.4□□□□□ -0.11
Hcn3O88705 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hcn3O88705 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.39□□□□□ -0.11
Hcn3O88705 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hcn3O88705 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.39□□□□□ -0.11
Hcn3O88705 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.39□□□□□ -0.11
Hcn3O88705 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hcn3O88705 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn3O88705 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Hcn3O88705 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.38□□□□□ -0.11
Hcn3O88705 Olfr129-201ENSMUST00000122318 993 ntBASIC14.38□□□□□ -0.11
Hcn3O88705 Gm21362-201ENSMUST00000194272 928 ntBASIC14.38□□□□□ -0.11
Hcn3O88705 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.38□□□□□ -0.11
Hcn3O88705 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Hcn3O88705 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hcn3O88705 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Hcn3O88705 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
Hcn3O88705 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms