Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tgfbr3O88393 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.22□□□□□ -0.13
Tgfbr3O88393 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Gm27533-201ENSMUST00000183800 152 ntBASIC14.22□□□□□ -0.13
Tgfbr3O88393 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tgfbr3O88393 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.21□□□□□ -0.13
Tgfbr3O88393 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm14719-201ENSMUST00000121891 340 ntBASIC14.21□□□□□ -0.13
Tgfbr3O88393 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.21□□□□□ -0.13
Tgfbr3O88393 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm16215-201ENSMUST00000161990 637 ntBASIC14.21□□□□□ -0.13
Tgfbr3O88393 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm27680-201ENSMUST00000184192 160 ntBASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tgfbr3O88393 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tgfbr3O88393 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.2□□□□□ -0.14
Tgfbr3O88393 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
Tgfbr3O88393 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tgfbr3O88393 Gm7488-201ENSMUST00000117148 684 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms