Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.7■□□□□ 0.58
Cfdp1O88271 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfdp1O88271 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfdp1O88271 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfdp1O88271 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.69■□□□□ 0.58
Cfdp1O88271 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.69■□□□□ 0.58
Cfdp1O88271 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.69■□□□□ 0.58
Cfdp1O88271 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfdp1O88271 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.69■□□□□ 0.58
Cfdp1O88271 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cfdp1O88271 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.68■□□□□ 0.58
Cfdp1O88271 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.68■□□□□ 0.58
Cfdp1O88271 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cfdp1O88271 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfdp1O88271 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Asic1-205ENSMUST00000228185 1818 ntBASIC18.67■□□□□ 0.58
Cfdp1O88271 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Rprl2-201ENSMUST00000157150 290 ntBASIC18.67■□□□□ 0.58
Cfdp1O88271 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Gm44335-201ENSMUST00000196879 141 ntBASIC18.67■□□□□ 0.58
Cfdp1O88271 Gm44297-201ENSMUST00000198304 141 ntBASIC18.67■□□□□ 0.58
Cfdp1O88271 Gm44346-201ENSMUST00000198851 141 ntBASIC18.67■□□□□ 0.58
Cfdp1O88271 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cfdp1O88271 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfdp1O88271 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.66■□□□□ 0.58
Cfdp1O88271 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfdp1O88271 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms