Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Phox2bO35690 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Gm16198-201ENSMUST00000118766 670 ntBASIC15.13■□□□□ 0.01
Phox2bO35690 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Phox2bO35690 Gm13366-201ENSMUST00000122198 970 ntBASIC15.13■□□□□ 0.01
Phox2bO35690 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Phox2bO35690 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Phox2bO35690 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Gm9063-201ENSMUST00000223299 582 ntBASIC15.13■□□□□ 0.01
Phox2bO35690 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.13■□□□□ 0.01
Phox2bO35690 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Phox2bO35690 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Phox2bO35690 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Phox2bO35690 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Phox2bO35690 Grk6-207ENSMUST00000225925 2769 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Mir3547-201ENSMUST00000175461 88 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Gm22119-201ENSMUST00000175594 99 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Gm9908-201ENSMUST00000211534 448 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Gm18246-201ENSMUST00000221023 728 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 CT010486.3-201ENSMUST00000224555 811 ntBASIC15.12■□□□□ 0.01
Phox2bO35690 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.12■□□□□ 0.01
Phox2bO35690 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Phox2bO35690 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.11■□□□□ 0.01
Phox2bO35690 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Phox2bO35690 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 AY702102-202ENSMUST00000194651 1173 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 Gm8515-201ENSMUST00000194852 576 ntBASIC15.11■□□□□ 0.01
Phox2bO35690 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.11■□□□□ 0.01
Phox2bO35690 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC15.11■□□□□ 0.01
Phox2bO35690 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Phox2bO35690 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Phox2bO35690 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Phox2bO35690 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms