Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Nr1i3O35627 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Gm7230-201ENSMUST00000173026 815 ntBASIC16.13■□□□□ 0.17
Nr1i3O35627 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nr1i3O35627 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.13■□□□□ 0.17
Nr1i3O35627 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.13■□□□□ 0.17
Nr1i3O35627 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Nr1i3O35627 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nr1i3O35627 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1i3O35627 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Gm6376-201ENSMUST00000209407 580 ntBASIC16.12■□□□□ 0.17
Nr1i3O35627 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nr1i3O35627 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1i3O35627 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nr1i3O35627 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nr1i3O35627 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1i3O35627 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.11■□□□□ 0.17
Nr1i3O35627 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.1■□□□□ 0.17
Nr1i3O35627 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.1■□□□□ 0.17
Nr1i3O35627 Gm21362-201ENSMUST00000194272 928 ntBASIC16.1■□□□□ 0.17
Nr1i3O35627 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Nr1i3O35627 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.1■□□□□ 0.17
Nr1i3O35627 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Nr1i3O35627 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nr1i3O35627 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms