Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ebf3O08791 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ebf3O08791 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ebf3O08791 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.59■□□□□ 0.09
Ebf3O08791 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.59■□□□□ 0.09
Ebf3O08791 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ebf3O08791 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.59■□□□□ 0.09
Ebf3O08791 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm10499-201ENSMUST00000174094 934 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm43125-201ENSMUST00000201724 730 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.59■□□□□ 0.09
Ebf3O08791 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.59■□□□□ 0.09
Ebf3O08791 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ebf3O08791 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ebf3O08791 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ebf3O08791 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ebf3O08791 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.59■□□□□ 0.09
Ebf3O08791 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ebf3O08791 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ebf3O08791 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.58■□□□□ 0.09
Ebf3O08791 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.58■□□□□ 0.09
Ebf3O08791 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.58■□□□□ 0.09
Ebf3O08791 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.58■□□□□ 0.09
Ebf3O08791 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ebf3O08791 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ebf3O08791 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ebf3O08791 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.58■□□□□ 0.08
Ebf3O08791 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.58■□□□□ 0.08
Ebf3O08791 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
Ebf3O08791 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ebf3O08791 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.58■□□□□ 0.08
Ebf3O08791 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.58■□□□□ 0.08
Ebf3O08791 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ebf3O08791 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.58■□□□□ 0.08
Ebf3O08791 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.58■□□□□ 0.08
Ebf3O08791 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ebf3O08791 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.57■□□□□ 0.08
Ebf3O08791 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.57■□□□□ 0.08
Ebf3O08791 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.57■□□□□ 0.08
Ebf3O08791 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ebf3O08791 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.57■□□□□ 0.08
Ebf3O08791 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ebf3O08791 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ebf3O08791 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms