Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.11□□□□□ -0.15
Colca2F8VPY8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.11□□□□□ -0.15
Colca2F8VPY8 Gm9182-201ENSMUST00000217829 639 ntBASIC14.11□□□□□ -0.15
Colca2F8VPY8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.11□□□□□ -0.15
Colca2F8VPY8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Mir6420-201ENSMUST00000185032 102 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Gm37230-201ENSMUST00000194491 818 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.1□□□□□ -0.15
Colca2F8VPY8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Colca2F8VPY8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm11425-201ENSMUST00000119608 498 ntBASIC14.09□□□□□ -0.15
Colca2F8VPY8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm5354-201ENSMUST00000182417 973 ntBASIC14.09□□□□□ -0.15
Colca2F8VPY8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm9396-201ENSMUST00000076703 567 ntBASIC14.09□□□□□ -0.15
Colca2F8VPY8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Colca2F8VPY8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Colca2F8VPY8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Colca2F8VPY8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Colca2F8VPY8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms