Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trim30cD3YVI9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm4518-201ENSMUST00000182638 718 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim30cD3YVI9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm13418-201ENSMUST00000119097 944 ntBASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm18195-201ENSMUST00000207604 706 ntBASIC16.41■□□□□ 0.22
Trim30cD3YVI9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim30cD3YVI9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms