Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 AY702102-202ENSMUST00000194651 1173 ntBASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Gm15806-201ENSMUST00000120696 955 ntBASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Gm5035-201ENSMUST00000215581 927 ntBASIC15.22■□□□□ 0.03
Col4a6B1AVK5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a6B1AVK5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Gm12585-201ENSMUST00000117307 290 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Gm12341-201ENSMUST00000119724 503 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Gm27701-201ENSMUST00000184498 110 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Mir6392-201ENSMUST00000184924 108 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.21■□□□□ 0.03
Col4a6B1AVK5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col4a6B1AVK5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Col4a6B1AVK5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col4a6B1AVK5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Gm9002-201ENSMUST00000178437 499 ntBASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col4a6B1AVK5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms