Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a4A2AX52 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm18062-201ENSMUST00000208020 547 ntBASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm18055-201ENSMUST00000208254 547 ntBASIC12.66□□□□□ -0.38
Col6a4A2AX52 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.66□□□□□ -0.38
Col6a4A2AX52 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a4A2AX52 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.66□□□□□ -0.38
Col6a4A2AX52 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a4A2AX52 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.66□□□□□ -0.38
Col6a4A2AX52 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Gm16215-201ENSMUST00000161990 637 ntBASIC12.65□□□□□ -0.38
Col6a4A2AX52 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.65□□□□□ -0.38
Col6a4A2AX52 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.65□□□□□ -0.38
Col6a4A2AX52 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a4A2AX52 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Col6a4A2AX52 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a4A2AX52 Gm27533-201ENSMUST00000183800 152 ntBASIC12.65□□□□□ -0.39
Col6a4A2AX52 Gm38225-201ENSMUST00000194001 393 ntBASIC12.65□□□□□ -0.39
Col6a4A2AX52 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.65□□□□□ -0.39
Col6a4A2AX52 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.64□□□□□ -0.39
Col6a4A2AX52 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gm9824-201ENSMUST00000178707 561 ntBASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a4A2AX52 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm12859-201ENSMUST00000117834 427 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.63□□□□□ -0.39
Col6a4A2AX52 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.63□□□□□ -0.39
Col6a4A2AX52 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms