Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7-5A0A0G2JFX6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm1401-201ENSMUST00000122048 772 ntBASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm45167-201ENSMUST00000208007 322 ntBASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7-5A0A0G2JFX6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Gm27628-201ENSMUST00000184911 107 ntBASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Psmb5-202ENSMUST00000227257 622 ntBASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav7-5A0A0G2JFX6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav7-5A0A0G2JFX6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms