Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.24□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6n-6A0A075B6B2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm15794-201ENSMUST00000120182 631 ntBASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm17807-201ENSMUST00000186869 298 ntBASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6n-6A0A075B6B2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms