Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8n-2A0A075B633 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gm43767-201ENSMUST00000198933 381 ntBASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8n-2A0A075B633 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Syt7-204ENSMUST00000223586 1344 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm15487-201ENSMUST00000122373 465 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm44855-201ENSMUST00000205725 362 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8n-2A0A075B633 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8n-2A0A075B633 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms