Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Gm7284-201ENSMUST00000131667 944 ntBASIC11.73□□□□□ -0.53
CcsQ9WU84 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Gm18115-201ENSMUST00000221209 621 ntBASIC11.73□□□□□ -0.53
CcsQ9WU84 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.73□□□□□ -0.53
CcsQ9WU84 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.73□□□□□ -0.53
CcsQ9WU84 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CcsQ9WU84 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcsQ9WU84 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Gm27704-201ENSMUST00000185094 107 ntBASIC11.72□□□□□ -0.53
CcsQ9WU84 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.72□□□□□ -0.53
CcsQ9WU84 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.72□□□□□ -0.53
CcsQ9WU84 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CcsQ9WU84 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcsQ9WU84 Matn2-206ENSMUST00000228570 2798 ntBASIC11.72□□□□□ -0.53
CcsQ9WU84 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CcsQ9WU84 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.71□□□□□ -0.53
CcsQ9WU84 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.71□□□□□ -0.53
CcsQ9WU84 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.71□□□□□ -0.53
CcsQ9WU84 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.71□□□□□ -0.53
CcsQ9WU84 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.71□□□□□ -0.53
CcsQ9WU84 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CcsQ9WU84 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CcsQ9WU84 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms