Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn11aQ9R053 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.62■□□□□ 0.41
Scn11aQ9R053 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.62■□□□□ 0.41
Scn11aQ9R053 Gm4875-201ENSMUST00000118257 786 ntBASIC17.62■□□□□ 0.41
Scn11aQ9R053 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.62■□□□□ 0.41
Scn11aQ9R053 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn11aQ9R053 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn11aQ9R053 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Gm14928-201ENSMUST00000120198 477 ntBASIC17.61■□□□□ 0.41
Scn11aQ9R053 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Gm3436-201ENSMUST00000179930 840 ntBASIC17.61■□□□□ 0.41
Scn11aQ9R053 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Gm8749-201ENSMUST00000117737 331 ntBASIC17.61■□□□□ 0.41
Scn11aQ9R053 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn11aQ9R053 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.61■□□□□ 0.41
Scn11aQ9R053 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn11aQ9R053 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Gm45384-201ENSMUST00000210451 277 ntBASIC17.6■□□□□ 0.41
Scn11aQ9R053 Gm45453-201ENSMUST00000211758 853 ntBASIC17.6■□□□□ 0.41
Scn11aQ9R053 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 BC001981-202ENSMUST00000191393 1545 ntBASIC17.6■□□□□ 0.41
Scn11aQ9R053 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn11aQ9R053 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.59■□□□□ 0.41
Scn11aQ9R053 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Gm27989-201ENSMUST00000184721 107 ntBASIC17.59■□□□□ 0.41
Scn11aQ9R053 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.59■□□□□ 0.41
Scn11aQ9R053 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms