Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm2213-201ENSMUST00000197485 688 ntBASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clcf1Q9QZM3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Gm4995-201ENSMUST00000117247 432 ntBASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Mir8117-201ENSMUST00000184773 107 ntBASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Grk6-207ENSMUST00000225925 2769 ntBASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clcf1Q9QZM3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms