Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Acot6-202ENSMUST00000222921 3622 ntBASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim44Q9QXA7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim44Q9QXA7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim44Q9QXA7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim44Q9QXA7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Matn2-206ENSMUST00000228570 2798 ntBASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Gm23547-201ENSMUST00000158210 271 ntBASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms