Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm18737-201ENSMUST00000173594 937 ntBASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube3bQ9ES34 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Gm27920-201ENSMUST00000183953 96 ntBASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube3bQ9ES34 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Gm25287-201ENSMUST00000103846 110 ntBASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Gm22918-201ENSMUST00000103855 110 ntBASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube3bQ9ES34 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22065-201ENSMUST00000103753 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22066-201ENSMUST00000103761 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24932-201ENSMUST00000103763 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24115-201ENSMUST00000103799 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22190-201ENSMUST00000103827 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22191-201ENSMUST00000103831 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24721-201ENSMUST00000103849 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm28018-201ENSMUST00000103869 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm26399-201ENSMUST00000103937 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm25349-201ENSMUST00000177728 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm23616-201ENSMUST00000177797 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm25871-201ENSMUST00000177816 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24752-201ENSMUST00000178240 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24496-201ENSMUST00000178287 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm25649-201ENSMUST00000178476 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm25548-201ENSMUST00000178681 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm23147-201ENSMUST00000178841 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm26095-201ENSMUST00000179270 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22171-201ENSMUST00000179283 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm23936-201ENSMUST00000179354 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm22619-201ENSMUST00000179516 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm25255-201ENSMUST00000179579 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm24755-201ENSMUST00000179691 110 ntBASIC17.81■□□□□ 0.44
Ube3bQ9ES34 Gm26506-201ENSMUST00000179692 110 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms