Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Gm38294-201ENSMUST00000192831 381 ntBASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf1Q9EPU4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf1Q9EPU4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC20.58■□□□□ 0.88
Cpsf1Q9EPU4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Gm25144-201ENSMUST00000179561 110 ntBASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Gm25352-201ENSMUST00000179815 110 ntBASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Gm27680-201ENSMUST00000184192 160 ntBASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf1Q9EPU4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Camk2g-217ENSMUST00000226630 1937 ntBASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gm9182-201ENSMUST00000217829 639 ntBASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf1Q9EPU4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms