Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Gm17968-201ENSMUST00000194902 784 ntBASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Gm44492-201ENSMUST00000197012 141 ntBASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssmem1Q9D9Y8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Gm2756-201ENSMUST00000195851 400 ntBASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssmem1Q9D9Y8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gm45747-201ENSMUST00000212203 999 ntBASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Celf4-206ENSMUST00000224553 1729 ntBASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssmem1Q9D9Y8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssmem1Q9D9Y8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms