Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
ShpkQ9D5J6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Gm15378-201ENSMUST00000121894 207 ntBASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ShpkQ9D5J6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ShpkQ9D5J6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Timm23-208ENSMUST00000226683 750 ntBASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ShpkQ9D5J6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms