Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc7Q9D541 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc7Q9D541 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc7Q9D541 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Ccdc7Q9D541 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ccdc7Q9D541 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Gm9103-201ENSMUST00000119371 405 ntBASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Gm21362-201ENSMUST00000194272 928 ntBASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc7Q9D541 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.57■□□□□ 0.4
Ccdc7Q9D541 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Gm6550-201ENSMUST00000187574 993 ntBASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Gm6376-201ENSMUST00000209407 580 ntBASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc7Q9D541 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms