Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Khdc3Q9CWU5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Gm9682-201ENSMUST00000197505 556 ntBASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Khdc3Q9CWU5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Khdc3Q9CWU5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Khdc3Q9CWU5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Khdc3Q9CWU5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms