Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm7Q9CQQ8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm16026-204ENSMUST00000162652 683 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm43767-201ENSMUST00000198933 381 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm20553-201ENSMUST00000204205 844 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.16■□□□□ 0.02
Lsm7Q9CQQ8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Celf4-206ENSMUST00000224553 1729 ntBASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Gm18889-201ENSMUST00000174284 929 ntBASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm7Q9CQQ8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Gm11543-201ENSMUST00000120758 370 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Gm25925-201ENSMUST00000158314 306 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Mir6990-201ENSMUST00000183724 91 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Gm5312-201ENSMUST00000203728 547 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms