Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm15358-201ENSMUST00000119249 520 ntBASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm8318-201ENSMUST00000182954 872 ntBASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nipsnap3bQ9CQE1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nipsnap3bQ9CQE1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm17807-201ENSMUST00000186869 298 ntBASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nipsnap3bQ9CQE1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms