Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Gm15173-201ENSMUST00000122049 433 ntBASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Gm7787-201ENSMUST00000216858 688 ntBASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Gm10819-201ENSMUST00000099988 561 ntBASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Trim11Q99PQ2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim11Q99PQ2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.13■□□□□ 0.33
Trim11Q99PQ2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Gm6550-201ENSMUST00000187574 993 ntBASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim11Q99PQ2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim11Q99PQ2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms