Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.15■□□□□ 0.18
Tlr3Q99MB1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tlr3Q99MB1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tlr3Q99MB1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Tlr3Q99MB1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm23935-201ENSMUST00000102303 57 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm24270-201ENSMUST00000102326 57 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm24245-201ENSMUST00000157318 57 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tlr3Q99MB1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gm43767-201ENSMUST00000198933 381 ntBASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tlr3Q99MB1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms