Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44357-201ENSMUST00000195897 142 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm19658-201ENSMUST00000196231 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44367-201ENSMUST00000196836 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44350-201ENSMUST00000197197 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44390-201ENSMUST00000197533 144 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44313-201ENSMUST00000198018 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44486-201ENSMUST00000198508 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44314-201ENSMUST00000199263 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44394-201ENSMUST00000199558 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44484-201ENSMUST00000199873 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44466-201ENSMUST00000200264 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm44359-201ENSMUST00000200671 138 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga3Q91XY5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm13418-201ENSMUST00000119097 944 ntBASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm6376-201ENSMUST00000209407 580 ntBASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm6296-201ENSMUST00000222599 943 ntBASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhga3Q91XY5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms