Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.19■□□□□ 0.34
Trex1Q91XB0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trex1Q91XB0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Gm27989-201ENSMUST00000184721 107 ntBASIC17.18■□□□□ 0.34
Trex1Q91XB0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.18■□□□□ 0.34
Trex1Q91XB0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trex1Q91XB0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Trex1Q91XB0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trex1Q91XB0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.16■□□□□ 0.34
Trex1Q91XB0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Gm25144-201ENSMUST00000179561 110 ntBASIC17.16■□□□□ 0.34
Trex1Q91XB0 Gm25352-201ENSMUST00000179815 110 ntBASIC17.16■□□□□ 0.34
Trex1Q91XB0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trex1Q91XB0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gm27437-201ENSMUST00000183429 107 ntBASIC17.15■□□□□ 0.34
Trex1Q91XB0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trex1Q91XB0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms