Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx41Q91VN6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ddx41Q91VN6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Gm44492-201ENSMUST00000197012 141 ntBASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx41Q91VN6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Gm26308-201ENSMUST00000157768 69 ntBASIC17.25■□□□□ 0.35
Ddx41Q91VN6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Chchd1-203ENSMUST00000224633 557 ntBASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx41Q91VN6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms