Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm8410-201ENSMUST00000117225 605 ntBASIC14.87□□□□□ -0.03
Vsx1Q91V10 Gm12490-201ENSMUST00000120255 560 ntBASIC14.87□□□□□ -0.03
Vsx1Q91V10 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Gm18187-201ENSMUST00000196476 984 ntBASIC14.87□□□□□ -0.03
Vsx1Q91V10 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vsx1Q91V10 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gm15487-201ENSMUST00000122373 465 ntBASIC14.86□□□□□ -0.03
Vsx1Q91V10 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Vsx1Q91V10 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.85□□□□□ -0.03
Vsx1Q91V10 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Gm9824-201ENSMUST00000178707 561 ntBASIC14.85□□□□□ -0.03
Vsx1Q91V10 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.85□□□□□ -0.03
Vsx1Q91V10 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.85□□□□□ -0.03
Vsx1Q91V10 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.84□□□□□ -0.03
Vsx1Q91V10 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.84□□□□□ -0.03
Vsx1Q91V10 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm14719-201ENSMUST00000121891 340 ntBASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms