Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Gm4459-201ENSMUST00000118750 468 ntBASIC13.51□□□□□ -0.25
Odf4Q8VI88 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.51□□□□□ -0.25
Odf4Q8VI88 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm25990-201ENSMUST00000102440 86 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm8097-201ENSMUST00000117903 829 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm12350-201ENSMUST00000121208 462 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm12497-201ENSMUST00000138778 237 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm36967-201ENSMUST00000193814 266 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Gm5364-201ENSMUST00000216789 889 ntBASIC13.5□□□□□ -0.25
Odf4Q8VI88 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Odf4Q8VI88 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.49□□□□□ -0.25
Odf4Q8VI88 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Odf4Q8VI88 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms