Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Gm3365-201ENSMUST00000216296 1480 ntBASIC21.17■□□□□ 0.98
Cd109Q8R422 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cd109Q8R422 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Cd109Q8R422 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd109Q8R422 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Gm27631-201ENSMUST00000184163 466 ntBASIC21.16■□□□□ 0.98
Cd109Q8R422 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd109Q8R422 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cd109Q8R422 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd109Q8R422 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd109Q8R422 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cd109Q8R422 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Gm4875-201ENSMUST00000118257 786 ntBASIC21.15■□□□□ 0.98
Cd109Q8R422 Gm11424-201ENSMUST00000121929 829 ntBASIC21.15■□□□□ 0.98
Cd109Q8R422 Mir1897-201ENSMUST00000122581 272 ntBASIC21.15■□□□□ 0.98
Cd109Q8R422 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Cd109Q8R422 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.15■□□□□ 0.98
Cd109Q8R422 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd109Q8R422 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 Syt7-205ENSMUST00000224135 1557 ntBASIC21.14■□□□□ 0.98
Cd109Q8R422 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd109Q8R422 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC21.14■□□□□ 0.97
Cd109Q8R422 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cd109Q8R422 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cd109Q8R422 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd109Q8R422 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Gm15653-201ENSMUST00000119247 907 ntBASIC21.13■□□□□ 0.97
Cd109Q8R422 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Gm29667-201ENSMUST00000190817 490 ntBASIC21.13■□□□□ 0.97
Cd109Q8R422 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Tfap2a-203ENSMUST00000223869 2037 ntBASIC21.13■□□□□ 0.97
Cd109Q8R422 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Gm21009-201ENSMUST00000197169 1669 ntBASIC21.13■□□□□ 0.97
Cd109Q8R422 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd109Q8R422 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.13■□□□□ 0.97
Cd109Q8R422 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cd109Q8R422 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Cd109Q8R422 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cd109Q8R422 Gm45453-201ENSMUST00000211758 853 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cd109Q8R422 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cd109Q8R422 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms