Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm12008-201ENSMUST00000117791 755 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm15467-201ENSMUST00000120582 445 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sf3a1Q8K4Z5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sf3a1Q8K4Z5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sf3a1Q8K4Z5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Sf3a1Q8K4Z5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.39■□□□□ 0.54
Sf3a1Q8K4Z5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3a1Q8K4Z5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Gm8000-201ENSMUST00000188378 592 ntBASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Gm17968-201ENSMUST00000194902 784 ntBASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sf3a1Q8K4Z5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Gm14494-201ENSMUST00000118786 435 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Mir8117-201ENSMUST00000184773 107 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Gm5264-201ENSMUST00000190584 848 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms