Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
E4f1Q8CCE9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
E4f1Q8CCE9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.68■□□□□ 0.42
E4f1Q8CCE9 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.68■□□□□ 0.42
E4f1Q8CCE9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
E4f1Q8CCE9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Mir1895-201ENSMUST00000122615 79 ntBASIC17.67■□□□□ 0.42
E4f1Q8CCE9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gm27494-201ENSMUST00000184735 189 ntBASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gm44872-201ENSMUST00000207864 420 ntBASIC17.67■□□□□ 0.42
E4f1Q8CCE9 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
E4f1Q8CCE9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
E4f1Q8CCE9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms