Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.45□□□□□ -0.26
Rft1Q8C3B8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Gm27459-201ENSMUST00000184860 107 ntBASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rft1Q8C3B8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rft1Q8C3B8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms