Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Gm43347-201ENSMUST00000200226 580 ntBASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
Ccdc40Q8BI79 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Gm27459-201ENSMUST00000184860 107 ntBASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc40Q8BI79 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Gm11780-201ENSMUST00000136880 516 ntBASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc40Q8BI79 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc40Q8BI79 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc40Q8BI79 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms