Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.84□□□□□ -0.03
Ubp1Q811S7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.84□□□□□ -0.03
Ubp1Q811S7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubp1Q811S7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Ubp1Q811S7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ubp1Q811S7 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.83□□□□□ -0.03
Ubp1Q811S7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ubp1Q811S7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ubp1Q811S7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ubp1Q811S7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.83□□□□□ -0.04
Ubp1Q811S7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm43514-201ENSMUST00000198852 424 ntBASIC14.83□□□□□ -0.04
Ubp1Q811S7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.83□□□□□ -0.04
Ubp1Q811S7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubp1Q811S7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.82□□□□□ -0.04
Ubp1Q811S7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.82□□□□□ -0.04
Ubp1Q811S7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubp1Q811S7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubp1Q811S7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.81□□□□□ -0.04
Ubp1Q811S7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubp1Q811S7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms